Date of Award
Spring 5-12-2018
Level of Access Assigned by Author
Open-Access Dissertation
Degree Name
Doctor of Philosophy (PhD)
Department
Marine Biology
Advisor
Yong Chen
Second Committee Member
Robert Steneck
Third Committee Member
Joseph Zydlewski
Additional Committee Members
Kate Beard
Burton Shank
Abstract
Of the most iconic fish species in the world, the Atlantic cod (Gadus morhua, hereafter, cod) has been a mainstay in the North Atlantic for centuries. While many global fish stocks have received increased pressure with the advent of new, more efficient fishing technology in the mid-20th century, exceptional pressure has been placed on this prized gadoid. Bycatch, or the unintended catch of organisms, is one of the biggest global fisheries issues. Directly resulting from the failed recovery of cod in the GoM, attention has been placed as to possible sources of unaccounted catch. Among the most prominent is that of the GoM American lobster (Homarus americanus) trap fishery. My dissertation research contributes to solving these problems by making progress in five areas: Evaluating cod discard survivability, characterizing lobster effort, estimating cod bycatch, incorporating various bycatch scenarios into the current stock assessment framework, and providing an in-depth policy analysis for management to move forward. This dissertation proceeds as follows: Chapter 1 will briefly introduce regional fishing history, and the study species. Chapter 2 a will provide a preliminary habitat analysis and field project with the object of understanding when and where cod are caught as bycatch, and their subsequent survivability post-release. Chapter 3 develops a quasi-stationary bootstrapped Generalized Additive Model method to estimate Maine’s effective lobster effort spanning 2006-2013. Chapter 4 builds on the same methodologies to estimate Atlantic cod bycatch rates on the congruent spatiotemporal scale, then incorporates uncertainties from both lobster effort and bycatch rates to estimate spatiotemporal cod bycatch. Chapter 5 uses estimates from the previous chapter alongside available federal cod data to estimate historic age-structure and magnitude of cod bycatch from 1982-2016. Then, multiple scenarios are evaluated in the current assessment framework and I report on updated assessment model diagnostics and a novel approach to retrospective analysis. Chapter 6 will conclude with a detailed policy analysis of the state of fisheries in the GoM, and how cod bycatch from the lobster fishery may be equitably incorporated as to ensure productive fisheries across groundfish and lobster sectors while minimizing conflicts.
Recommended Citation
Boenish, Robert E., "Spatio-Temporal Dynamics of Atlantic Cod Bycatch in the Maine Lobster Fishery and Its Impacts on Stock Assessment" (2018). Electronic Theses and Dissertations. 2829.
https://digitalcommons.library.umaine.edu/etd/2829
Base M=0.2 model, no discards
Base_2017_MRAMP_DONOTCHANGE.DAT (86 kB)
Base 2017 MRAMP model, no discards
BASE_2017_M0.2_DISCARDS.DAT (107 kB)
100% discards median M0.2 model
BASE_2017_MRAMP_DISCARDS.DAT (107 kB)
100% discards median MRAMP model
BASE_2017_MRAMP50_DISCARDS.DAT (107 kB)
50% mort median MRAMP scenario
BASE_2017_M0.2_DISCARDS_MOD.DAT (106 kB)
Legault modified discards
MRAMP_MOD_DISCARDS.DAT (106 kB)
Legault modeified discard model median catch
2017M0.2_DONTCHANGE.DAT (86 kB)
10 x discards, try to break, model not converged
Included in
Aquaculture and Fisheries Commons, Biostatistics Commons, Longitudinal Data Analysis and Time Series Commons, Marine Biology Commons, Natural Resources and Conservation Commons, Natural Resources Management and Policy Commons, Population Biology Commons, Statistical Methodology Commons, Statistical Models Commons, Zoology Commons